Transcription Factor Claification转录因子分类_pvfactor是什么意思
Transcription Factor Claification转录因子分类由刀豆文库小编整理，希望给你工作、学习、生活带来方便，猜你可能喜欢“pvfactor是什么意思”。
Transcription Factor Claification Last modified 2002-10-01Supercla: Basic Domains
1.1 Cla: Leucine zipper factors(bZIP).1.1.1.1 Subfamily: Jun 1.1.1 Family: AP-1(-like)components
1.1.1.1.1 XBP-1(human).1.1.1.1.2 v-Jun(ASV).1.1.1.1.3 c-Jun(mouse);c-Jun(rat);c-Jun(human);c-Jun(chick).1.1.1.1.4 JunB(mouse).1.1.1.1.5 JunD(mouse).1.1.1.2 Subfamily: Fos
1.1.1.2.1 v-Fos(FBR MuLV);v-Fos(FBJ MuLV);v-Fos(NK24).1.1.1.2.2 c-Fos(mouse);c-Fos(human);c-Fos(rat);c-Fos(chick).1.1.1.2.3 FosB(mouse).1.1.1.2.3.1 FosB1 1.1.1.2.3.2 FosB2
1.1.1.2.4 Fra-1(mouse);Fra-1(rat).1.1.1.2.5 Fra-2(chick);Fra-2(human).1.1.1.2.6 dFRA(fruit fly).1.1.1.3 Subfamily: Maf
1.1.1.2.7 LRF-1(rat).1.1.1.3.1 v-Maf(AS42).1.1.1.3.2 c-Maf(chick);c-Maf(mouse).1.1.1.3.2.1 1.1.1.3.2.2 1.1.1.3.3 MafB(chick).1.1.1.3.4 MafK(chick);MafK(mouse).1.1.1.3.5 MafF(chick).1.1.1.3.6 MafG(chick).1.1.1.3.7 NRL(human);NRL(mouse).1.1.1.4 Subfamily: NF-E2
1.1.1.3.8 kreisler(mouse).1.1.1.1.6 dJRA
1.1.1.4.1 NF-E2 p45(human);NF-E2 p45(mouse).1.1.1.4.1.1 aNF-E2
1.1.1.4.2 Nrf1
1.1.1.4.1.2 fNF-E2
1.1.1.4.2.1 Nrf1 long form(human).1.1.1.4.2.2 Nrf1 short form(human).1.1.1.4.3 Nrf2(human).1.1.1.4.4 ECH(chick).1.1.1.5 Subfamily: fungal AP-1-like factors
1.1.1.5.1 GCN4(yeast).1.1.1.5.2 CPC1(Neurospora craa).1.1.1.5.3 yAP-1(yeast).1.1.1.5.4 yAP-2(yeast).1.1.1.6 Subfamily: CRE-BP/ATF
1.1.1.6.2 ATF-3
1.1.1.6.2.1 ATF-3(human).1.1.1.6.3 CRE-BP
1.1.1.6.2.2 ATF-3DeltaZip(human).1.1.1.6.3.1 CRE-BP1(human).1.1.1.6.3.2 CRE-BP2(mouse).1.1.1.6.3.3 CRE-BP3 1.1.1.6.4 CRE-BPa(human).1.1.1.6.5 ATF-a
1.1.1.6.5.1 ATF-a(human).1.1.1.6.6 yATF(yeast);yATF(fiion yeast).1.1.1.0.1 Zta(EBV).1.1.2 Family: CREB
1.1.1.0.2 CYS3(Neurospora craa).1.1.2.0.1 CREB
1.1.2.0.1.1 CREB-341(human);CREB-341(rat);CREB-341(mouse).1.1.2.0.1.2 CREB-327(rat).1.1.2.0.1.3 CREBbeta(mouse).1.1.2.0.2 ATF-1(human);ATF-1(mouse).1.1.2.0.3 CREM
1.1.2.0.3.1 CREMalpha(mouse).1.1.2.0.3.2 CREMbeta(mouse).1.1.2.0.3.3 CREMgamma(mouse).1.1.2.0.3.4 CREMepsilon(mouse).1.1.2.0.3.5 CREMtau(mouse);CREMtau(rat).1.1.2.0.3.6 CREMtaualpha(mouse).1.1.2.0.3.7 CREMtau1(mouse).1.1.2.0.3.8 CREMtau2(mouse).1.1.2.0.3.9 CREMdeltaC-F(rat).1.1.2.0.3.10 CREMdeltaC-G(rat).1.1.1.6.5.2 ATF-aDelta(human).1.1.1.5.5 Pap1+(fiion yeast).1.1.1.6.1 CREB-2(human).1.1.1.4.5 Cnc(fruit fly).1.1.1.0 Subfamily: Others
1.1.2.0.3.11 S-CREM(mouse).1.1.2.0.3.12 ICER-I(mouse).1.1.2.0.3.13 ICER-Igamma(mouse).1.1.2.0.3.14 ICER-II(mouse);ICER-II(human).1.1.2.0.3.15 ICER-IIgamma(mouse);ICER-IIgamma(human).1.1.2.0.4 BBF-2(fruit fly).1.1.2.0.5 dCREB2
1.1.2.0.5.1 dCREB2-a(fruit fly).1.1.2.0.5.2 dCREB2-b 1.1.2.0.5.3 dCREB2-c 1.1.2.0.5.4 dCREB2-d 1.1.2.0.5.5 dCREB2-q 1.1.2.0.5.6 dCREB2-r
1.1.2.0.6 SKO1(yeast).1.1.2.0.6.1 1.1.2.0.6.2 1.1.2.0.7 HAC1(yeast).1.1.3 Family: C/EBP-like factors
1.1.2.0.8 Pcr1(fiion yeast).1.1.3.0.1 C/EBPalpha
1.1.3.0.1.1 C/EBPalpha(mouse);C/EBPalpha(human);C/EBPalpha(rat).1.1.3.0.1.2 p30C/EBPalpha(chick);p30C/EBPalpha(mouse);p30C/EBPalpha(rat).1.1.3.0.2 C/EBPbeta
1.1.3.0.1.3 p20C/EBPalpha(mouse).1.1.3.0.2.1 C/EBPbeta(mouse);C/EBPbeta(rat);C/EBPbeta(human).1.1.3.0.2.2 p34C/EBPbeta 1.1.3.0.2.3 LIP(rat).1.1.3.0.2.4 p20C/EBPbeta(mouse).1.1.3.0.3 C/EBPgamma(mouse).1.1.3.0.4 C/EBPdelta(rat);C/EBPdelta(human);C/EBPdelta(mouse).1.1.3.0.5 C/EBPepsilon(rat).1.1.3.0.6 CHOP-10(mouse);CHOP-10(chinese hamster).1.1.3.0.7 slbo(fruit fly).1.1.4 Family: bZIP / PAR
1.1.3.0.8 AcC/EBP(Aplysia).1.1.2.0.5.7 dCREB2-s
1.1.4.0.1 DBP(rat).1.1.4.0.2 VBP(chick).1.1.4.0.3 Hlf(human).1.1.5 Family: Plant G-box binding factors
1.1.5.1 Subfamily: CPRF-2(“V”)
1.1.5.1.1 CPRF-2(parsley).1.1.5.2.1 HBP-1a(1)(wheat).1.1.5.2.2 EmBP-1a
1.1.5.2.3 EmBP-1b(wheat).1.1.5.2.4-->GBF1(maize)(maize).1.1.5.2.5 GBF2(thale cre).1.1.5.2.6 GBF3(thale cre).1.1.5.2.7 CPRF-1(parsley).1.1.5.3 Subfamily: HBP-1a(“Q”)
1.1.5.2.8 TAF-1(tobacco).1.1.5.3.1 HBP-1a(wheat).1.1.5.3.2 HBP-1a(c14)(wheat).1.1.5.3.3 GBF9
1.1.5.3.4 GBF1(A.t., G.m.)(thale cre).1.1.5.3.5 GBF4 1.1.5.3.6 GBF12
1.1.5.3.7 CPRF-3(parsley).1.1.5.4.1 TGA1a(tobacco).1.1.5.4.2 HBP-1b/OBF3.1(wheat);HBP-1b/OBF3.1(maize).1.1.5.4.3 HBP-1b(c1)(wheat).1.1.5.4.5 OBF3.2(maize).1.1.5.4.6 OBF4(thale cre).1.1.5.5 Subfamily: TGA1b(“R”)
1.1.5.5.2 O2(maize).1.1.6.0.1 SWI6(yeast).1.1.6.0.2 SWI4(yeast).1.1.6.0.3 STE4(fiion yeast).1.1.6.0.4 IREBF-1(mouse).1.1.0 Family: Other bZIP factors
1.1.0.0.2 OPI1 1.1.6.0.5 GCF(human).1.1.0.0.1 Giant(fruit fly).1.1.5.4.7 OBF5(thale cre).1.1.5.5.1 TGA1b(tobacco).1.1.6 Family: ZIP only
1.1.4.0.4 TEF(rat).1.1.5.2 Subfamily: EmBP-1(“E”)
1.1.5.4 Subfamily: TGA1a(“L/M”)1.2 Cla: Helix-loop-helix factors(bHLH).1.2.1.0.1 E2A 1.2.1 Family: Ubiquitous(cla A)factors
1.2.1.0.1.1 E12(human);E12(rat);E12(mouse);E12(clawed frog).1.2.1.0.1.2 E47(human);E47(rat);E47(rat);E47(mouse).1.2.1.0.2 E2-2
1.2.1.0.1.3 ITF-1(human).1.2.1.0.2.1 ITF-2 / SEF2-1B(human).1.2.1.0.2.2 SEF2-1A 1.2.1.0.3 m3(mouse).1.2.1.0.4 HEB / SCBP(human).1.2.1.0.4.1 SCBPgamma(mouse);SCBPgamma(rat).1.2.1.0.4.2 SCBPalpha(mouse);SCBPalpha(rat);SCBPalpha(hamster);SCBPalpha(chick).1.2.1.0.5 Daughterle(fruit fly).1.2.1.0.4.3 SCBPbeta(rat).1.2.2 Family: Myogenic transcription factors
1.2.2.0.1 MyoD(human);MyoD(clawed frog);MyoD(mouse);MyoD(quail).1.2.2.0.2 Myogenin(human);Myogenin(mouse);Myogenin(chick);Myogenin(rat);Myogenin(quail).1.2.2.0.3 Myf-5(human);Myf-5(clawed
frog);Myf-5(mouse);Myf-5(cattle);Myf-5(chick).1.2.2.0.4 MRF4(rat);MRF4(human);MRF4(mouse);MRF4(chick);MRF4(clawed frog).1.2.2.0.5 SUM-1(sea urchin).1.2.2.0.6 CeMyoD(Caenorhabditis elegans).1.2.2.0.7 Nau(fruit fly).1.2.3 Family: Achaete-Scute
1.2.2.0.8 Esc1(fiion yeast).1.2.3.0.1 Lethal of Scute(fruit fly).1.2.3.0.2 Scute(fruit fly).1.2.3.0.3 Achaete(fruit fly).1.2.3.0.4 Asense(fruit fly).1.2.3.0.6 MASH-1(rat);MASH-1(mouse);MASH-1(human);MASH-1(clawed frog).1.2.3.0.7 MASH-2(rat).1.2.3.0.8 ASH-3a(clawed frog).1.2.4 Family: Tal/Twist/Atonal/Hen
1.2.3.0.9 ASH-3b(clawed frog).1.2.4.1 Subfamily: Lymphoid factors
1.2.4.1.1 Tal-1
1.2.4.1.1.1 p42Tal-1(human).1.2.4.1.1.2 p39Tal-1 1.2.4.1.1.3 p22Tal-1 1.2.4.1.1.4 1.2.4.1.1.5 1.2.4.1.1.6 1.2.4.1.1.7 1.2.4.1.1.8 1.2.4.1.1.9
1.2.4.1.2 Tal-2(human);Tal-2(mouse).1.2.4.1.3 Lyl-1(human);Lyl-1(mouse).1.2.4.1.3.1 1.2.4.2 Subfamily: Mesodermal Twist-like factors
1.2.4.2.1 Twist(fruit fly).1.2.4.2.2 M-Twist(mouse).1.2.4.2.3 Dermo-1(mouse).1.2.4.2.4 bHLH-EC2(human);bHLH-EC2(mouse).1.2.4.2.5 Th1(mouse).1.2.4.3 Subfamily: HEN
1.2.4.4 Subfamily: Atonal
1.2.4.3.2 HEN2(human);HEN2(mouse).1.2.4.4.1 NeuroD / BETA2(Caenorhabditis
elegans);NeuroD / BETA2(clawed frog);NeuroD / BETA2(mouse);NeuroD / BETA2(hamster).1.2.4.4.2 LIN-32(Caenorhabditis elegans).1.2.4.4.3 Ato(fruit fly).1.2.4.4.4 MATH-1(mouse).1.2.4.5 Subfamily: Pancreatic factors
1.2.4.5.1 INSAF(hamster);INSAF(rat);INSAF(mouse);INSAF(human).1.2.5 Family: Hairy
1.2.4.5.2 BETA3(hamster).1.2.4.4.5 MATH-2(mouse).1.2.4.2.6 SGC1(yeast).1.2.4.3.1 HEN1(rat);HEN1(human);HEN1(mouse).1.2.4.1.3.2
1.2.5.1 Subfamily: Hairy
1.2.5.1.1 Hairy(fruit fly);Hairy(fruit fly).1.2.5.1.2 Deadpan(fruit fly).1.2.5.1.3 HES-1(rat);HES-1(mouse).1.2.5.1.4 HES-2(rat).1.2.5.1.5 HES-3(rat).1.2.5.1.6 HES-5(rat).1.2.5.2 Subfamily: Esp
1.2.5.1.7 Stra13(mouse).1.2.5.2.1 E(spl)m5(fruit fly).1.2.5.2.2 E(spl)m7(fruit fly).1.2.5.3 Subfamily: Fungal regulators
1.2.5.3.1 PHO4(yeast).1.2.5.3.2 NUC-1(Neurospora craa).1.2.6.0.1 AhR(mouse);AhR(rat);AhR(human).1.2.6.0.2 Arnt(human).1.2.6.0.2.1
1.2.6.0.3 Single-minded(fruit fly).1.2.7.0.1 INO2(yeast).1.2.8 Family: HLH domain only
1.2.7.0.2 INO4(yeast).1.2.8.0.1 Emc(fruit fly).1.2.8.0.2 Id1(mouse);Id1(human).1.2.8.0.2.1 Id1(long form)(rat).1.2.8.0.2.2 Id1(short form)(rat).1.2.8.0.3 Id2(mouse);Id2(human);Id2(rat).1.2.8.0.4 Id3(mouse);Id3(rat).1.2.8.0.5 Id4(mouse).1.2.8.0.6 Olf-1
1.2.8.0.6.1 Olf-1(rat).1.2.0 Family: Other bHLH factors
1.2.8.0.6.2 EBF(mouse).1.2.6.0.2.2
1.2.5.2.3 E(spl)m8(fruit fly).1.2.6 Family: Factors with PAS domain
1.2.7 Family: INO
1.2.0.0.1 Delilah(fruit fly).1.2.0.0.2 Lc(maize).1.3 Cla: Helix-loop-helix / leucine zipper factors(bHLH-ZIP).1.3.1 Family: Ubiquitous bHLH-ZIP factors
1.3.1.1 Subfamily: TFE3
1.3.1.1.1 TFE3 1.2.0.0.3 CBF1(yeast).1.3.1.1.1.1 TFE3-L(mouse);TFE3-L(human).1.3.1.1.1.2 TFE3-S(mouse).1.3.1.1.2 TFEB(human).1.3.1.1.3 TFEC(rat).1.3.1.1.4 Mi(human);Mi(mouse).1.3.1.1.4.1 Mi(419 AA)1.3.1.1.4.2 Mi(413 AA)1.3.1.2 Subfamily: USF
1.3.1.2.1 SpF1(sea urchin).1.3.1.2.2 USF(human);USF(rat);USF(mouse);USF(Kenyan clawed frog).1.3.1.2.3 USF2
1.3.1.2.3.1 USF2a(human);USF2a(mouse);USF2a(rat).1.3.1.2.3.2 USF2b(human).1.3.1.3 Subfamily: SREBP
1.3.1.2.3.3
1.3.1.3.1 SREBP-1(rat).1.3.1.3.1.1 SREBP-1a(human);SREBP-1a(hamster).1.3.1.3.1.2 SREBP-1b(human).1.3.1.3.2 SREBP-2(human);SREBP-2(hamster).1.3.1.4.1 AP-4(human).1.3.1.3.1.3 SREBP-1c(human).1.3.1.4 Subfamily: AP-4
1.3.2 Family: Cell-cycle controlling factors
1.3.2.1 Subfamily: Myc
c-Myc(mouse).1.3.2.1.1.1 c-Myc 2(c, h, m)1.3.2.1.1.2 c-Myc 1(c, h, m)1.3.2.1.1.3 p64c-Myc(X)
1.3.2.1.2 N-Myc(mouse);N-Myc(human);N-Myc(canary);N-Myc(chick);N-Myc(clawed frog).1.3.2.1.3 L-Myc
1.3.2.1.3.1 L-Myc(human);L-Myc(mouse);L-Myc(clawed frog).1.3.2.1.3.2 L-Myc(206 AA)(human).1.3.2.1.4 L-Myc2(X)(clawed frog).1.3.2.1.5 B-Myc(rat).1.3.2.2 Subfamily: Mad/Max
1.3.2.1.6 v-Myc(MC29).1.3.2.2.1 Max(mouse);Max().1.3.2.2.1.1 Max2(human).1.3.2.2.1.2 Max1(human).1.3.2.2.1.3 DeltaMax(human).1.3.2.2.2 Mad1(human);Mad1(mouse).1.3.2.2.3 Mxi1(human).1.3.2.2.3.1 Mxi1 1.3.2.2.3.2 Mxi1-WR
1.3.2.1.1 c-Myc(human);c-Myc(chick);c-Myc(rat);
1.3.2.2.4 Mad3(mouse).1.4 Cla: NF-1
1.3.2.2.5 Mad4(mouse).1.4.1 Family: NF-1
1.4.1.0.1 NF-1A /mNF-1B
1.4.1.0.1.1 NF-1A1(chick).1.4.1.0.1.2 NF-1A1.1(rat);NF-1A1.1(chick);NF-1A1.1(rat).1.4.1.0.1.3 NF-1A2(rat).1.4.1.0.1.4 NF-1A3(rat).1.4.1.0.1.5 NF-1A4(chick).1.4.1.0.1.6 NF-1A5(chick).1.4.1.0.2 NF-1B
.1.4.1.0.2.2 NF-1B2(chick).1.4.1.0.2.3 NF-1B3(mouse).1.4.1.0.3 NF-1C
1.4.1.0.2.4 NF-1B4(mouse).1.4.1.0.1.7 NF-1A6
1.4.1.0.2.1 NF-1B1(chick);NF-1B1(hamster)
1.4.1.0.3.1 NF-1C1 / CTF-1(domestic pig);NF-1C1 / CTF-1(human);NF-1C1 / CTF-1(chick);NF-1C1 / CTF-1(clawed frog).1.4.1.0.3.2 NF-1C2 / CTF-2(human);NF-1C2 / CTF-2(chick).1.4.1.0.3.3 CTF-3(human).1.4.1.0.3.4 CTF-4
1.4.1.0.3.5 CTF-5(human).1.4.1.0.3.6 CTF-6
1.4.1.0.3.7 CTF-7(human).1.4.1.0.4 NF-1X(chick).1.4.1.0.3.8 NF-1C4(chick).1.4.1.0.4.1 NF-1X1(clawed frog).1.4.1.0.4.2 NF-1X2(clawed frog).1.5 Cla: RF-X
1.4.1.0.4.3 NF-1X3(clawed frog).1.5.1 Family: RF-X
1.5.1.0.1 RF-X1(mouse).1.5.1.0.2 RF-X2(human);RF-X2(mouse).1.5.1.0.3 RF-X3(human);RF-X3(mouse).1.5.1.0.3.1
1.5.1.0.4 RF-X5(human).1.5.1.0.3.2
1.6 Cla: bHSH 1.6.1 Family: AP-2
1.6.1.0.1 AP-2alpha
1.6.1.0.1.1 AP-2alphaA /
AP-2alpha1(mouse);AP-2alphaA / AP-2alpha1(human).1.6.1.0.1.2 AP-2alpha2(mouse).1.6.1.0.1.3 AP-2alpha3(mouse).1.6.1.0.1.4 AP-2alpha4(mouse).1.6.1.0.1.5 AP-2alphaB(human).1.6.1.0.2 AP-2beta(human);AP-2beta(mouse).1.6.1.0.3 AP-2gamma(human);AP-2gamma(mouse).Supercla: Zinc-coordinating DNA-binding domains
2.1 Cla: Cys4 zinc finger of nuclear receptor type.2.1.1 Family: Steroid hormone receptors
2.1.1.1 Subfamily: Corticoid receptors
2.1.1.1.1.1 GR a
2.1.1.1.2 MR(rat);MR(human).2.1.1.1.1.2 GR b
2.1.1.1.1 GR(rat);GR(mouse);GR(human).2.1.1.2 Subfamily: Progesterone receptor
2.1.1.2.1.1 PR-B 2.1.1.3 Subfamily: Androgen receptor
2.1.1.3.1.1 AR-A 2.1.1.4 Subfamily: Estrogen receptor
2.1.1.3.1.2 AR-B 2.1.1.2.1.2 PR-A
2.1.1.2.1 PR(human);PR(rabbit);PR(chick).2.1.1.3.1 AR(human);AR(mouse);AR(rat).2.1.1.4.1 ER(rat);ER(mouse);ER(human);ER(clawed frog);ER(chick).2.1.1.4.1.1 ER(h)/ ER-A(X)2.1.1.4.1.2 ER(482 AA)(h)2.1.2 Family: Thyroid hormone receptor-like factors
2.1.2.1 Subfamily: Retinoic acid receptors
frog).2.1.2.1.1.1 RAR-alpha1(human);RAR-alpha1(mouse).2.1.2.1.1.2 RAR-alpha2(mouse).2.1.2.1.1 RAR-alpha(mouse);RAR-alpha(clawed
2.1.1.4.1.3 ER-B(X)
2.1.2.1.2 RAR-beta(mouse).2.1.2.1.2.1 RAR-beta1(mouse).2.1.2.1.2.2 RAR-beta2(human);RAR-beta2(mouse).2.1.2.1.2.3 RAR-beta3(mouse).2.1.2.1.2.4 RAR-beta4(mouse).2.1.2.1.3 RAR-gamma(human);RAR-gamma(mouse).2.1.2.1.3.1 RAR-gamma1(human);RAR-gamma1(mouse);RAR-gamma1(clawed frog).2.1.2.1.3.2 RAR-gamma2(mouse);RAR-gam
2.1.2.1.4 RAR-delta
ma2(clawed frog).2.1.2.2 Subfamily: Retinoid X receptors
2.1.2.2.1 RXR-alpha(mouse);RXR-alpha(human);RXR-alpha(clawed frog).2.1.2.2.2 RXR-beta(mouse);RXR-beta(human);RXR-beta(rat).2.1.2.2.2.1 RXR-beta1
2.1.2.2.2.2 RXR-beta2(mouse).2.1.2.2.3 RXR-gamma(mouse);RXR-gamma(clawed frog).2.1.2.3 Subfamily: Thyroid hormone receptors
2.1.2.3.1 T3R-alpha(human);T3R-alpha(rat);T3R-alpha(mouse);T3R-alpha(chick);T3R-alpha();T3R-alpha().2.1.2.3.1.1 T3R-alpha1(human);T3R-alpha1(rat);T3R-alpha1();T3R-alpha1();T3R-alpha1().2.1.2.3.1.2 T3R-alpha2(human);T3R-alpha2（2.1.2.3.2 T3R-beta(rat);T3R-beta().2.1.2.3.2.1 T3R-beta1(human);T3R-beta1(rat);T3R-beta1(chick);T3R-beta1().2.1.2.3.2.2 T3R-beta2(rat);T3R-beta2(chick)
2.1.2.3.3 Rev-ErbAalpha(rat).;T3R-beta2();T3R-beta2().2.1.2.3.3.1 Rev-ErbAalpha(long)2.1.2.4 Subfamily: Vitamin D receptor 2.1.2.5 Subfamily: NGFI-B 2.1.2.6 Subfamily: FTZ-F1
2.1.2.4.1 VDR
rat);T3R-alpha2().2.1.2.2.4 USP
2.1.2.3.3.2 Rev-ErbAalpha(short)
2.1.2.5.1 NGFI-B(rat).2.1.2.6.1 SF-1
2.1.2.6.1.1 FTZ-F1-like
2.1.2.6.2 FTZ-F1
2.1.2.6.1.2 ELP 2.1.2.6.2.1 alpha FTZ-F1 2.1.2.7 Subfamily: PPAR
2.1.2.6.2.2 beta FTZ-F1
2.1.2.7.3 PPARalpha(clawed frog).2.1.2.7.4 PPARbeta(clawed frog).2.1.2.7.5 PPARgamma(clawed frog).2.1.2.7.5.1 PPARgamma2 2.1.2.8 Subfamily: EcR
2.1.2.7.5.2 PPARgamma1
2.1.2.8.1 EcR(fruit fly).2.1.2.8.1.1 EcR A 2.1.2.8.1.2 EcR B1 2.1.2.8.1.3 EcR B2
2.1.2.9 Subfamily: ROR
2.1.2.9.1 HR3
2.1.2.9.2 RORalpha / RZRalpha
2.1.2.9.2.1 RORalpha1 2.1.2.9.2.2 RORalpha2 2.1.2.9.2.3 RORalpha3 2.1.2.9.3 RZRbeta 2.1.2.10 Subfamily: Tll / COUP
2.1.2.10.1 Taille(fruit fly).2.1.2.10.2 Tlx 2.1.2.10.3 TR2
2.1.2.10.3.1 TR2-11(human).2.1.2.10.3.2 TR2-5(human).2.1.2.10.3.3 TR2-9(human).2.1.2.10.3.4 TR2-7 2.1.2.10.4 TR4
2.1.2.10.5 COUP-TFI(rat);COUP-TFI(chick);COUP-TFI(human).2.1.2.11 Subfamily: HNF-4
2.1.2.10.6 ARP-1 / COUP-TFII 2.1.2.11.1 HNF-4alpha
2.1.2.11.1.1 HNF-4alpha1(rat);HNF-4alpha1(human);HNF-4alpha1(mouse);HNF-4alpha1(clawed frog).2.1.2.11.1.2 HNF-4alpha2(human);HNF-4alpha2(rat);HNF-4alpha2(mouse).2.1.2.9.4 RORgamma
2.1.2.11.1.3 HNF-4alpha3(human).2.1.2.11.1.4 HNF-4alpha4(human).2.1.2.11.1.5 HNF-4alpha5 2.1.2.11.1.6 HNF-4alpha6
2.1.2.11.1.7 HNF-4alpha7(mouse).2.1.2.11.2 HNF-4beta(clawed frog).2.1.2.12 Subfamily: CF1
2.1.2.11.3 HNF-4gamma(human).2.1.2.12.1 CF1(fruit fly).2.1.2.13.1 Knirps(fruit fly).2.1.2.13 Subfamily: Knirps
2.2 Cla: diverse Cys4 zinc fingers.2.2.1 Family: GATA-Factors
2.2.1.1 Subfamily: vertebral GATA-Factors
2.2.1.1.1 GATA-1
2.2.1.1.1.1 GATA-1(chick);GATA-1(clawed frog);GATA-1(mouse);GATA-1(human).2.2.1.1.1.2 GATA-1s
2.2.1.1.2 GATA-2(chick);GATA-2(human);GATA-2(clawed frog).2.2.1.1.3 GATA-3(mouse);GATA-3(human);GATA-3(clawed frog);GATA-3(chick).2.2.1.2 Subfamily: fungal metabolic regulators
2.2.1.2.1 AREA / NIT-2(Neurospora craa).2.2.1.2.2 GLN3 2.2.1.2.3 UGA 43 2.2.1.2.4 NTL 1 2.2.2.0.1 Ttx(fruit fly).2.2.1.1.4 GATA-4
2.2.2 Family: Trithorax
2.2.0 Family: Other factors
2.2.2.0.2 Hrx 2.2.0.0.1 BUF2
2.3 Cla: Cys2His2 zinc finger domain.2.3.1 Family: Ubiquitous factors
2.3.1.0.1 TFIIIA
2.3.1.0.2 Sp1(mouse);Sp1(rat);Sp1(human).2.3.1.0.3 Sp3 2.3.1.0.4 Sp4 2.3.2 Family: Developmental / cell cycle regulators
2.3.2.1 Subfamily: Egr/Krox
2.3.2.1.1 SWI5(yeast).2.3.2.1.2 Egr-1(human);Egr-1(mouse);Egr-1(mou2.3.1.0.5 YY1(human).se);Egr-1(rat).2.3.2.1.3 Egr-2(human);Egr-2(mouse).2.3.2.2 Subfamily: Krueppel-like
2.3.2.2.1 Krueppel(fruit fly).2.3.2.2.2 Hunchback(fruit fly).2.3.2.2.3 Gla(fruit fly).2.3.2.2.4 Odd-skipped(fruit fly).2.3.2.2.5 Ovo(fruit fly).2.3.2.2.6 Snail(fruit fly).2.3.2.2.7 CF2
2.3.2.2.7.1 CF2-I(fruit fly).2.3.2.2.7.2 CF2-II(fruit fly).2.3.2.2.8 Evi-1(mouse).2.3.2.2.9 Ikaros(mouse).2.3.2.2.10 MZF-1(human).2.3.2.2.11 Sdc-1(Caenorhabditis elegans).2.3.2.2.12 NRSF
2.3.2.2.12.1 NRSF form 1
2.3.2.2.13 Gfi-1
2.3.2.2.12.2 NRSF form 2 2.3.2.2.7.3 CF2-III(fruit fly).2.3.2.1.4 Egr-3(human).2.3.2.3 Subfamily: GLI-like
2.3.2.3.1 GLI(human).2.3.2.3.2 GLI3(human).2.3.2.3.3 WT1
2.3.2.3.3.1 WT1 +KTS(human).2.3.2.3.3.2 WT1-KTS(human).2.3.2.3.3.3 WT1 I 2.3.2.3.3.4 WT1 I-KTS 2.3.2.3.3.5 WT1-del2
2.3.2.3.4 Tra-1
2.3.2.3.3.6 WT1-del2 I
2.3.2.3.4.1 Tra-1(long)(Caenorhabditis elegans).2.3.2.3.4.2 Tra-1(short)(Caenorhabditis elegans).2.3.2.3.5 RME1(yeast).2.3.2.0 Subfamily: Others
2.3.2.3.6 BrlA(Aspergillus nidulans).2.3.2.0.1 Teashirt(fruit fly).2.3.2.0.2 Tramtrack
2.3.2.0.2.1 Tramtrack 69K(fruit fly).2.3.2.0.2.2 Tramtrack 88K(fruit fly).2.3.3 Family: Metabolic regulators in fungi
2.3.3.0.1 ACE2(yeast).2.3.3.0.2 ADR1(yeast).2.3.3.0.3 MIG1(yeast).2.3.3.0.4 CreA(Aspergillus nidulans).2.3.3.0.5 MSN2(yeast).2.3.4 Family: Large factors with NF-6B-like binding properties
2.3.4.0.1 HIV-EP1(human).2.3.4.0.2 HIV-EP2(human).2.3.4.0.3 MBP-2(human).2.3.4.0.4 KBP-1(human).2.3.4.0.5 alphaA-CRYBP1(mouse).2.3.5 Family: Viral regulators
2.3.4.0.6 AGIE-BP1(rat).2.3.5.0.1 T-Ag(SV40).2.3.3.0.6 MSN4(yeast).2.3.2.0.3 RGM1
2.4 Cla: Cys6 cysteine-zinc cluster.2.4.1 Family: Metabolic regulators in fungi
2.4.1.0.1 ARG RII(yeast).2.4.1.0.2 CAT8
2.4.1.0.3 GAL4(yeast).2.4.1.0.4 HAP1(yeast).2.4.1.0.5 MAL63(yeast).2.4.1.0.6 LEU3(yeast).2.4.1.0.7 UGA3
2.4.1.0.8 qa-1F(Neurospora craa).2.4.1.0.9 UME6(yeast).2.4.1.0.10 AmdR(Aspergillus nidulans).2.4.1.0.11 PUT3
2.5 Cla: Zinc fingers of alternating composition
2.5.1 Family: Cx7Hx8Cx4C zinc fingers 2.5.2 Family: Cx2Hx4Hx4C zinc fingers
2.5.1.0.1 BAF1(yeast).2.5.2.0.1 Byr3(fiion yeast).Supercla: Helix-turn-helix
3.1 Cla: Homeo domain.3.1.1 Family: Homeo domain only
3.1.1.1 Subfamily: AbdB
3.1.1.1.1 Abd-B(chick).3.1.1.1.2 Ceh-11
3.1.1.1.3 HOXA9(chick);HOXA9(human);HOXA9(mouse);HOXA9(guinea pig).3.1.1.1.3.1 GPK5(G.p.)3.1.1.1.3.2 GPK9(G.p.)
3.1.1.1.4 HOXB9(human);HOXB9(mouse);HOXB9(clawed frog).3.1.1.1.5 HOXC9
3.1.1.1.6 HOXD9(human);HOXD9(mouse);HOXD9(chick).3.1.1.1.7 HOXA10(chick);HOXA10(mouse).3.1.1.1.7.1 PL1(human).3.1.1.1.7.2 PL2(human).3.1.1.1.8 HOXC10
3.1.1.1.9 HOXD10(human);HOXD10(mouse);HOXD10(chick).3.1.1.1.10 HOXA11(chick);HOXA11(mouse).3.1.1.1.11 HOXC11
3.1.1.1.12 HOXD11(chick);HOXD11(mouse);HOXD11(newt).3.1.1.1.13 HOXC12
3.1.1.1.14 HOXD12(chick);HOXD12(mouse).3.1.1.1.15 HOXA13 3.1.1.1.16 HOXC13 3.1.1.2 Subfamily: Antp
3.1.1.1.17 HOXD13(chick);HOXD13(mouse).3.1.1.2.1 abd-A(fruit fly).3.1.1.2.2 Antp(fruit fly).3.1.1.2.2.1 3.1.1.2.2.2 3.1.1.2.3 Ceh-15 3.1.1.2.4 Dfd(fruit fly).3.1.1.2.5 Flh(zebra fish);Flh(clawed frog).3.1.1.2.6 Ftz(fruit fly).3.1.1.2.7 HOXA2(mouse);HOXA2(rat);HOXA2(chick).3.1.1.2.8 HOXB2
3.1.1.2.9 HOXA3(mouse).3.1.1.2.10 HOXB3(chick);HOXB3(human);HOXB3(mouse);HOXB3(clawed frog).3.1.1.2.10.1(m)3.1.1.2.10.2(m)3.1.1.2.11 HOXD3
3.1.1.2.12 HOXA4(chick);HOXA4(mouse);HOXA4(human).3.1.1.2.13 HOXB4(chick);HOXB4(human);HOXB4(mouse);HOXB4(clawed frog).3.1.1.2.14 HOXC4
3.1.1.2.15 HOXD4(human);HOXD4(mouse);HOXD4(chick).3.1.1.2.16 HOXA5(mouse);HOXA5(human).3.1.1.2.17 HOXB5(human);HOXB5(mouse).3.1.1.2.18 HOXC5(human).3.1.1.2.19 HOXA6
3.1.1.2.20 HOXB6(human);HOXB6(mouse).3.1.1.2.20.1 3.1.1.2.20.2
3.1.1.2.21 HOXC6(human);HOXC6(mouse);HOXC6(mouse);HOXC6(clawed frog);HOXC6(clawed frog);HOXC6(zebra fish).3.1.1.2.22 HOXA7(mouse);HOXA7(clawed
frog);HOXA7(human);HOXA7(quail);HOXA7(rat).3.1.1.2.22.1(X.l.)3.1.1.2.22.2(X.l.)
3.1.1.2.23 HOXB7(human);HOXB7(mouse);HOXB7(clawed frog).3.1.1.2.24 HOXB8(chick);HOXB8(mouse).3.1.1.2.25 HOXC8(mouse).3.1.1.2.26 HOXD8(mouse);HOXD8(chick).3.1.1.2.27 IPF1(mouse);IPF1(rat).3.1.1.2.28 Mab-5 3.1.1.2.29 NK-1
3.1.1.2.30 Pb(fruit fly);Pb(fruit fly).3.1.1.2.30.1 3.1.1.2.30.2 3.1.1.2.30.3 3.1.1.2.30.4 3.1.1.2.31 Scr(fruit fly).3.1.1.2.32 Ubx(fruit fly);Ubx(fruit fly);Ubx(fruit fly).3.1.1.2.32.1 3.1.1.2.32.2 3.1.1.2.32.3 3.1.1.2.32.4 3.1.1.2.33 Zen-1(fruit fly).3.1.1.3 Subfamily: Cad
3.1.1.2.34 Zen-2(fruit fly).3.1.1.3.1 Cad(fruit fly).3.1.1.3.2 Cdx-1(chick);Cdx-1(mouse);Cdx-1(rat);Cdx-1(clawed frog).3.1.1.3.3 Cdx-2(mouse).3.1.1.4 Subfamily: Cut
3.1.1.3.4 Cdx-3(golden hamster).3.1.1.4.1 CDP(human).3.1.1.5 Subfamily: Dll
3.1.1.4.2 Cut(fruit fly).3.1.1.5.1 Dll(fruit fly).3.1.1.6 Subfamily: Ems
3.1.1.5.2 Dlx-1(mouse);Dlx-1(clawed frog).3.1.1.6.1 Ems(fruit fly).3.1.1.6.2 EMX1(human);EMX1(mouse).3.1.1.7 Subfamily: En
3.1.1.6.3 EMX2(human);EMX2(mouse).3.1.1.7.1 En(fruit fly).3.1.1.7.2 En-1(chick);En-1(human);En-1(mouse).3.1.1.8 Subfamily: Eve
3.1.1.7.3 En-2(chick);En-2(human);En-2(mouse).3.1.1.8.1 Eve(grahopper);Eve(fruit fly).3.1.1.8.2 Evx-1(human);Evx-1(chick);Evx-1(mous3.1.1.9 Subfamily: Prd
3.1.1.9.1 al 3.1.1.9.2 Alx3
3.1.1.9.3 Gsc(chick);Gsc(mouse);Gsc(clawed frog);Gsc(clawed frog).3.1.1.9.4 K-2(human).3.1.1.9.4.1 K-2a(mouse).3.1.1.9.4.2 K-2b(mouse).3.1.1.9.6 Otd(fruit fly).3.1.1.9.7 Otx1(human);Otx1(mouse);Otx1(rat).3.1.1.9.8 Otx2(human);Otx2(mouse).3.1.1.9.9 Phox-2(mouse).3.1.1.10 Subfamily: HD-ZIP
3.1.1.10.1 HAT1 3.1.1.10.2 HAT2 3.1.1.10.3 HAT3 3.1.1.10.4 HAT4 3.1.1.10.5 HAT7 3.1.1.10.6 HAT9 3.1.1.10.7 HAT14 3.1.1.10.8 HAT22 3.1.1.9.10 Unc-4
3.1.1.9.5 S8(mouse);S8(chick).e).3.1.1.10.9 Athb-1(thale cre).3.1.1.10.10 Athb-2(thale cre).3.1.1.10.11 Athb-3 3.1.1.11 Subfamily: H2.0
3.1.1.10.12 Athb-4
3.1.1.11.1 HB24(human);HB24(mouse).3.1.1.11.2 Hox11 / Hlx(human);Hox11 / 3.1.1.12 Subfamily: HNF1
3.1.1.12.1 HNF-1
3.1.1.12.1.1 HNF-1A(human);HNF-1A(rat);HNF-1A(mouse);HNF-1A(chick).3.1.1.12.1.2 HNF-1B(human).3.1.1.12.2 vHNF-1
3.1.1.12.1.3 HNF-1C(human).Hlx(mouse).3.1.1.12.2.1 vHNF-1A(rat);vHNF-1A(mouse);vHNF-1A(human);vHNF-1A(domestic pig).3.1.1.12.2.2 vHNF-1B(human).3.1.1.13 Subfamily: Lab
(clawed frog).3.1.1.13.1.1 ERA-1-993 3.1.1.13.1.2 ERA-1-399 mouse);HOXB1(clawed frog).3.1.1.13.3 HOXD1(mouse).3.1.1.13.4 Lab(fruit fly);Lab(fruit fly).3.1.1.13.4.1 Lab(635 AA)3.1.1.14 Subfamily: Msh
3.1.1.13.4.2 Lab(629 AA)
3.1.1.13.2 HOXB1(chick);HOXB1(human);HOXB1（3.1.1.12.2.3 vHNF-1C(human).3.1.1.13.1 HOXA1(human);HOXA1(mouse);HOXA1
3.1.1.14.1 Msx-1(chick);Msx-1(chick);Msx-1(human);Msx-1(mouse);Msx-1(newt).3.1.1.14.2 Msx-2(chick);Msx-2(human);Msx-2(mo3.1.1.15 Subfamily: NK-2
3.1.1.15.1 NK-2 3.1.1.15.2 NK-3 3.1.1.15.3 NK-4
3.1.1.15.4 Nkx-2.2(mouse).3.1.1.15.5 Nkx-2.5(mouse).3.1.1.15.6 Nkx-6.1 3.1.1.15.7 Tinman use);Msx-2(quail).3.1.1.15.8 TTF-1(rat);TTF-1(human);TTF-1(chick)3.1.1.16 Subfamily: Bcd
;TTF-1(mouse);TTF-1(cattle).3.1.1.16.1 Bcd(fruit fly).3.1.1.17.1 Hesx1/XANF-1 3.1.1.18.1 Ceh-20 3.1.1.18.2 Exd(fruit fly).3.1.1.18.3 MATa1(yeast).3.1.1.18.4 Pbx1
3.1.1.18.4.1 Pbx1a(human).3.1.1.18.4.2 Pbx1b(human);Pbx1b(mouse).3.1.1.18.5 Pbx2 3.1.1.18.6 Pbx3
3.1.1.18.6.1 Pbx3a 3.1.1.0 Subfamily: not aigned
3.1.1.0.1 Gtx(mouse).3.1.1.0.2 KN1(maize).3.1.1.0.3 Knox3(barley).3.1.1.0.4 MATalpha1(yeast).3.1.1.0.5 MATalpha2(yeast).3.1.1.0.6 Pc(fiion yeast).3.1.1.0.7 PHO2(yeast).3.1.1.0.8 Prh(chick);Prh(human).3.1.1.0.9 Ro(fruit fly).3.1.1.0.10 Zeste(fruit fly).3.1.1.0.11 Zmhox1a(maize).3.1.1.0.12 HAT24 3.1.1.0.13 Unc-30 3.1.1.0.14 HB9 3.1.1.0.15 BarH1 3.1.1.0.16 BarH2 3.1.1.0.17 Aalpha Y1 3.1.1.0.18 Aalpha Y2 3.1.1.0.19 Aalpha Y3 3.1.1.0.20 alpha2-1 3.1.1.0.21 beta2-1 3.1.2 Family: POU domain factors
3.1.2.1 Subfamily: I
3.1.2.1.1 Pit-1 3.1.1.0.22 d1-1
3.1.1.18.6.2 Pbx3b 3.1.1.17 Subfamily: XANF 3.1.1.18 Subfamily: PBC
3.1.2.1.1.1 Pit-1a(rat).3.1.2.1.1.2 Pit-1b(human);Pit-1b(mouse);Pit-1b(rat).3.1.2.2 Subfamily: II
3.1.2.1.1.3 Pit-1c(rat).3.1.2.2.1 Oct-1(human);Oct-1(clawed frog);Oct-1(rat).3.1.2.2.1.1 Oct-1A(mouse).3.1.2.2.1.2 Oct-1B(mouse).3.1.2.2.2 Oct-2
3.1.2.2.1.3 Oct-1C(mouse).3.1.2.2.2.1 Oct-2.1(human);Oct-2.1(mouse);Oct-2.1(rat).3.1.2.2.2.2 Oct-2.2/Oct-2A(human);Oct-2.2/Oct-2A(mouse);Oct-2.2/Oct-2A(rat).3.1.2.2.2.3 Oct-2.3(mouse).3.1.2.2.2.4 Oct-2.4(mouse).3.1.2.2.2.5 Oct-2.5/Oct-2B(human);Oct-2.5/Oct-2B(mouse);Oct-2.5/Oct-2B(rat).3.1.2.2.2.6 Oct-2.6(mouse).3.1.2.2.2.7 Oct-2.7(rat).3.1.2.2.2.8 Oct-2.8(rat).3.1.2.2.3 Oct-11(mouse).3.1.2.2.4 dOct-2(fruit fly).3.1.2.2.5 PDM-1(fruit fly).3.1.2.2.6 PDM-2(fruit fly).3.1.2.2.7 Nrl-16 3.1.2.2.8 Oct-1.5 3.1.2.2.9 Oct-1.13 3.1.2.2.10 Oct-1.17 3.1.2.3 Subfamily: III
3.1.2.2.11 Oct-1.32
3.1.2.3.1 POU-M1(silk moth).3.1.2.3.2 N-Oct-3
3.1.2.3.2.1 N-Oct-3(human);N-Oct-3(rat);N-Oct-3(mouse).3.1.2.3.2.2 N-Oct-5A(human).3.1.2.3.2.3 N-Oct-5B(human).3.1.2.3.3 Oct-6(human);Oct-6(mouse);Oct-6(rat).3.1.2.3.4 Brn-4(mouse);Brn-4(rat);Brn-4(human);Brn-4(clawed frog).3.1.2.3.5 Cf1a(fruit fly).3.1.2.3.6 Brn-1
3.1.2.3.7 Nrl-19 3.1.2.3.8 Nrl-20 3.1.2.4 Subfamily: IV
3.1.2.3.9 XLPOU-1/Nrl-22 3.1.2.4.1 Brn-3a(rat).3.1.2.4.1.1 Brn-3a(l)(mouse).3.1.2.4.1.2 Brn-3a(s)(human);Brn-3a(s)(mouse).3.1.2.4.2 Brn-3b(human);Brn-3b(mouse).3.1.2.4.3 Brn-3c 3.1.2.4.4 I-POU
3.1.2.4.4.1 I-POU(fruit fly).3.1.2.4.7 Unc-86
3.1.2.4.4.2 tI-POU(fruit fly).3.1.2.4.7.1 Unc-86(Caenorhabditis elegans).3.1.2.5 Subfamily: V
3.1.2.4.7.2 Unc-86(429 aa)
3.1.2.5.1 Oct-3/4
3.1.2.5.1.1 Oct-5(mouse).3.1.2.5.1.2 Oct-3A(mouse);Oct-3A(human).3.1.2.5.1.3 Oct-3B(human).3.1.2.5.2 Oct-3C ? 3.1.2.5.3 pou2
3.1.2.5.3.1 pou2(zebra fish).3.1.2.5.3.2 t-Pou2(zebra fish).3.1.2.5.4 Oct-25 3.1.2.5.5 Oct-60 3.1.2.5.6 Oct-91 3.1.2.6.1 Brn-5
3.1.2.6.1.2 Brn-5(c2)(mouse);Brn-5(c2)(rat).3.1.2.6.1.3 Brn-5(c1)(mouse).3.1.2.6.1.4 Brn-5(c7)(mouse).3.1.2.6.2 TCFbeta1(human).3.1.2.6.3 pou[c](zebra fish).3.1.2.6 Subfamily: VI
3.1.2.0 Subfamily: other POU factors
3.1.2.0.1 CEH-18(Caenorhabditis elegans).3.1.2.0.2 Sprm-1(rat).3.1.3 Family: Homeo domain with LIM region
3.1.2.0.3 b1-1
3.1.3.1 Subfamily: Homeo domain with LIM region
3.1.3.1.1 Lin-11(Caenorhabditis elegans).3.1.3.1.2 Isl-1(rat).3.1.3.1.3 Lmx-1(golden hamster).3.1.3.1.4 Lim-1(chick);Lim-1(human);Lim-1(mouse);Lim-1(clawed frog).3.1.3.1.5 Lim-3(clawed
frog);Lim-3(mouse);Lim-3(chick).3.1.3.1.5.1 3.1.3.1.5.2 3.1.3.1.5.3
3.1.3.1.6 LH-2(rat);LH-2(human);LH-2(chick);LH-2(mouse).3.1.3.1.7 Ap(fruit fly).3.1.3.1.8 Mec-3(Caenorhabditis elegans).3.1.3.1.9 Isl-2 3.1.3.1.10 Lim-2 3.1.3.2 Subfamily: LIM-only transcription(co-)factors
3.1.3.2.1 MLP(rat).3.1.4 Family: homeo domain plus zinc finger motifs
3.1.4.0.1 ATBF1
3.1.4.0.1.1 ATBF1-B(human).3.1.4.0.1.2 ATBF1-A(human).3.1.4.0.2 Zfh1(fruit fly).3.2 Cla: Paired box.3.1.4.0.3 Zfh2(fruit fly).3.1.3.2.2 DMLP1(fruit fly).3.1.3.1.11 Lmx2
3.2.1 Family: Paired plus homeo domain
3.2.1.0.1 Prd(fruit fly).3.2.1.0.2 Pax-3(human);Pax-3(mouse).3.2.1.0.3 Pax-6(mouse);Pax-6(zebra fish);Pax-6(human).3.2.1.0.3.1 Pax-6 / Pd-5(human).3.2.1.0.3.2 Pd-5a 3.2.1.0.4 Pax-7(human).3.2.1.0.5 Gsb(fruit fly).3.2.2 Family: Paired domain only
3.2.1.0.6 Gsbn(fruit fly).3.2.2.0.1 Pax-1(human);Pax-1(mouse).3.2.2.0.2 Pax-2(mouse).3.2.2.0.2.1 Pax-2a 3.2.2.0.2.2 Pax-2b
3.2.2.0.3 Pax-5(human);Pax-5(mouse).3.2.2.0.4 Pax-8(rat).3.2.2.0.4.1 Pax-8a(human);Pax-8a(mouse).3.2.2.0.4.2 Pax-8b(human).3.2.2.0.4.3 Pax-8c(human).3.2.2.0.5 Poxn
3.2.2.0.4.4 Pax-8d(human).3.3 Cla: Fork head / winged helix.3.3.1 Family: Developmental regulators
3.3.1.0.1 Fkh(fruit fly).3.3.1.0.2 Slp1(fruit fly).3.3.1.0.3 Slp2(fruit fly).3.3.1.0.4 lin-31(Caenorhabditis elegans).3.3.1.0.5 XFD-1(clawed frog).3.3.1.0.6 BF-1(rat);BF-1(human);BF-1(mouse).3.3.1.0.7 v-Qin(ASV 31).3.3.1.0.8 c-Qin(chick).3.3.1.0.9 Axial(zebra fish).3.3.1.0.10 Croc(fruit fly).3.3.2 Family: Tiue-specific regulators
3.3.1.0.11 Whn(mouse).3.3.2.0.1 HNF-3alpha(rat);HNF-3alpha(human).3.3.2.0.2 HNF-3beta(rat);HNF-3beta(clawed frog);HNF-3beta(mouse);HNF-3beta().3.3.2.0.3 HNF-3gamma(rat).3.3.2.0.4 HFH-4 3.3.3 Family: Cell-cycle controlling factors
3.3.3.1 Subfamily: E2F
3.3.2.0.5 SGF-1(silk moth).3.3.3.1.1 E2F-1(human);E2F-1(mouse).3.3.3.1.2 E2F-2(human).3.3.3.1.3 E2F-3(human).3.3.3.1.4 E2F-4(human).3.3.3.1.5 E2F-5(human).3.3.3.2 Subfamily: DP
3.3.3.1.6 dE2F(fruit fly).3.3.3.2.1 DP-1(human);DP-1(mouse).3.3.3.2.2 DP-2(human).3.3.3.2.3 DP-3(mouse).3.3.0 Family: Other regulators
3.3.0.0.2 FKHR 3.3.0.0.3 HTLF 3.3.0.0.4 QRF-1
3.3.0.0.5 HCM1(yeast).3.3.0.0.6 FD1 3.3.0.0.7 FD2
3.3.3.2.4 dDP(fruit fly).3.3.0.0.1 ILF(human).3.3.0.0.8 FD3 3.3.0.0.9 FD4 3.3.0.0.10 FD5 3.3.0.0.11 HFH-1 3.3.0.0.12 HFH-2(rat).3.3.0.0.13 HFH-3 3.3.0.0.14 HFH-4 3.3.0.0.15 HFH-5 3.3.0.0.16 HFH-6 3.3.0.0.17 HFH-7 3.3.0.0.18 HFH-B2 3.3.0.0.19 HFH-B3 3.3.0.0.20 Fkh-1 3.3.0.0.21 Fkh-2 3.3.0.0.22 Fkh-3 3.3.0.0.23 Fkh-4 3.3.0.0.24 Fkh-5
3.3.0.0.25 Fkh-6(mouse).3.4 Cla: Heat shock factors
3.4.1 Family: HSF
3.3.0.0.26 BF-2(human);BF-2(mouse).3.4.1.0.1 HSF1
3.4.1.0.1.1 HSF1(long)(human).3.4.1.0.1.2 HSF1(short)(mouse);HSF1(short)(clawed frog);HSF1
(short)(human);HSF1(short)(chick).3.4.1.0.2 HSF2(mouse);HSF2(human);HSF2(chick).3.4.1.0.3 HSF3(chick).3.4.1.0.4 dHSF(fruit fly).3.4.1.0.5 HSF24(tomato).3.4.1.0.6 HSF30(tomato).3.4.1.0.7 HSF8(tomato).3.4.1.0.8 fungal HSF(yeast);fungal HSF(fiion yeast);fungal HSF(yeast).3.5 Cla: Tryptophan clusters.3.5.1 Family: Myb
3.5.1.1 Subfamily: Myb-factors
3.5.1.1.1 c-Myb(human);c-Myb(mouse);c-Myb(chick).3.5.1.1.2 A-Myb(chick);A-Myb(human);A-Myb(mouse);A-Myb(clawed frog).3.5.1.1.2.1 A-Myb 3.5.1.1.2.2 A-Myb
3.5.1.1.3 B-Myb(human);B-Myb(chick);B-Myb(mouse).3.5.1.1.4 v-Myb(AMV);v-Myb(AEV).3.5.1.1.5 GL1(thale cre).3.5.1.1.6 MybSt1(potato).3.5.1.1.7 P
3.5.1.1.7.1 P(long)(maize).3.5.1.1.8 C1
3.5.1.1.7.2 P(short)(maize).3.5.1.1.8.1 C1(long)(maize).3.5.1.1.8.2 C1(short)(maize).3.5.1.1.9 MYB.Ph2
3.5.1.1.10 MYB.Ph3(Petunia hybrida).3.5.1.1.11 ATMYB1 3.5.1.2 Subfamily: Myb-like factors
3.5.1.2.1 BAS1(yeast).3.5.1.2.2 REB1(yeast);REB1(yeast).3.5.1.2.3 FlbD(Aspergillus nidulans).3.5.1.2.4 Adf-1(fruit fly).3.5.2 Family: Ets-type
3.5.1.2.5 RAP1(yeast).3.5.2.0.1 c-Ets-1
3.5.2.0.1.1 c-Ets-1 p54(mouse);c-Ets-1 p54(human);c-Ets-1 p54(chick).3.5.2.0.1.2 c-Ets-1 p68(c)(chick).3.5.2.0.1.3 Ets-1 DeltaIV
3.5.2.0.1.4 Ets-1 DeltaVII(human).3.5.2.0.1.5 Ets-1 Delta IV/VII).3.5.2.0.3 v-Ets(E26 AEV).3.5.2.0.4 PEA3(mouse);PEA3(human).3.5.2.0.5 Elk-1(human).3.5.2.0.6 SAP-1
3.5.2.0.6.1 SAP-1a(human).3.5.2.0.6.2 SAP-1b
3.5.2.0.7 SAP-2(mouse);SAP-2(human).3.5.2.0.8 Erg-1
3.5.2.0.8.1 Erg-1(human).3.5.2.0.8.2 Erg-2(human).3.5.2.0.8.3 p38erg(human).3.5.2.0.8.4 p55erg 3.5.2.0.8.5 p49erg
3.5.2.0.2 Ets-2(human);Ets-2(chick);Ets-2(mouse3.5.1.1.12 ATMYB2
3.5.2.0.9 Fli-1(mouse).3.5.2.0.9.1 Fli-1a 3.5.2.0.9.2 Fli-1b 3.5.2.0.10 PU.1(mouse).3.5.2.0.11 Spi-B(human).3.5.2.0.12 E4TF1-60 /
GABP-alpha(mouse);E4TF1-60 / GABP-alpha(human).3.5.2.0.13 Elf-1(human).3.5.2.0.14 Tel(human).3.5.2.0.15 E74
3.5.2.0.15.1 E74A(fruit fly).3.5.2.0.15.2 E74B(fruit fly).3.5.2.0.16 yan(fruit fly).3.5.2.0.17 Pnt
3.5.2.0.17.1 P1(fruit fly).3.5.2.0.17.2 P2(fruit fly).3.5.2.0.18 Elg(fruit fly).3.5.2.0.19 D-Ets-3 3.5.2.0.20 D-Ets-4 3.5.2.0.21 D-Ets-6 3.5.2.0.22 N-Ets-3 3.5.2.0.23 ER71 3.5.3 Family: Interferon-regulating factors
3.5.3.0.1 IRF-1(mouse);IRF-1(human);IRF-1(rat).3.5.3.0.2 IRF-2(mouse);IRF-2(human).3.5.3.0.3 IRF-3(chick).3.5.3.0.4 Pip(mouse).3.5.3.0.5 ICSBP(mouse).3.5.3.0.6 LSIRF-2(mouse).3.6 Cla: TEA domain.3.5.3.0.7 ISGF-3gamma(human).3.5.2.0.24 ER81
3.6.1 Family: TEA
3.6.1.0.1 TEF-1(human).3.6.1.0.2 Sd(fruit fly).3.6.1.0.3 TEC1(yeast).3.6.1.0.4 abaA(Aspergillus nidulans).Supercla: beta-Scaffold Factors with Minor Groove Contacts
4.1 Cla: RHR(Rel homology region).4.1.1 Family: Rel/ankyrin
4.1.1.0.1 NF-kappaB1
4.1.1.0.1.1 p105(mouse);p105(human);p105(rat).4.1.1.0.1.2 p50(rat);p50(human);p50(mou
4.1.1.0.2 NF-kappaB2
4.1.1.0.2.1 p100(human);p100(chick).4.1.1.0.2.2 p52(human).4.1.1.0.3 RelA
.4.1.1.0.3.2 p65Delta(human).4.1.1.0.4 RelB(human);RelB(mouse).4.1.1.0.5 c-Rel(human);c-Rel(mouse);c-Rel(chick).4.1.1.0.6 v-Rel(REV-T).4.1.2 Family: ankyrin only
an).4.1.2.0.2 IkappaBbeta(human);IkappaBbeta(chick);IkappaBbeta(mouse).4.1.2.0.3 IkappaBgamma
4.1.2.0.3.1 IkappaBgamma(mouse).4.1.2.0.3.2 IkappaBgamma-1(mouse).4.1.2.0.3.3 IkappaBgamma-2(mouse).4.1.2.0.4 IkappaBR(human).4.1.2.0.5 Bcl-3(human).4.1.3 Family: NF-AT
4.1.2.0.6 Cactus(fruit fly).4.1.3.0.1 NF-ATc(human);NF-ATc(mouse).4.1.3.0.2 NF-ATp(mouse);NF-ATp(human).4.1.3.0.2.1 4.1.3.0.2.2 4.1.3.0.2.3 4.1.3.0.3 NF-ATx(human).4.2 Cla: STAT
4.1.3.0.4 NF-ATc3(mouse).4.1.1.0.7 Dorsal(fruit fly).4.1.2.0.1 IkappaBalpha(human);IkappaBalpha(hum
4.1.1.0.2.3 p49(human).4.1.1.0.3.1 p65(human);p65(mouse);p65()se).4.2.1 Family: STAT
4.2.1.0.1 STAT1
4.2.1.0.1.1 p91(human);p91(mouse).4.2.1.0.1.2 p84(human).4.2.1.0.2 STAT2(human).4.2.1.0.3 STAT3(human);STAT3(mouse).4.2.1.0.4 STAT4(mouse);STAT4(human).4.2.1.0.5 STAT5A(sheep);STAT5A(mouse).4.2.1.0.6 STAT5B(mouse).4.3 Cla: p53
4.2.1.0.7 STAT6(human);STAT6(mouse).4.3.1 Family: p53
4.3.1.0.1 p53
4.3.1.0.1.1 p53(human);p53(mouse).4.3.1.0.1.2 p53as(mouse).4.4 Cla: MADS box.4.4.1 Family: Regulators of differentiation
4.4.1.1 Subfamily: MEF-2
4.4.1.1.1 MEF-2A
4.4.1.1.1.1 MEF-2A(mouse);MEF-2A(human);MEF-2A(clawed frog).4.4.1.1.1.2 aMEF-2(human).4.4.1.1.1.3 RSRFC4(human).4.4.1.1.2 MEF-2B
se).4.4.1.1.2.2 MEF-2B2(mouse).4.4.1.1.2.3 MEF-2B3(mouse).4.4.1.1.3 MEF-2C
4.4.1.1.2.4 MEF-2B4(mouse).4.4.1.1.3.1 MEF-2C(human).4.4.1.1.3.2 MEF-2C/ Delta8(human);MEF-2C/ Delta8(mouse).4.4.1.1.3.3 MEF-2C/Delta32(human).4.4.1.1.4 MEF-2D
4.4.1.1.3.4 MEF-2C/Delta8,Delta32(human).4.4.1.1.4.1 MEF-2DAB(human);MEF-2DAB(clawed frog);MEF-2DAB(mouse).4.4.1.1.4.2 MEF-2DA'B(human).4.4.1.1.4.3 MEF-2D0B(human).4.4.1.1.4.4 MEF-2DA0(human).4.4.1.1.4.5 MEF-2DA'0(mouse);MEF-2DA'0(human).4.4.1.1.4.6 MEF-2D00(human).4.4.1.1.1.4 RSRFC9(human).4.4.1.1.2.1 MEF-2B1(human);MEF-2B1(mou4.4.1.2 Subfamily: homeotic genes
4.4.1.1.5 D-MEF2(fruit fly).4.4.1.2.1 AG(thale cre);AG(rape).4.4.1.2.2 AP1(thale cre).4.4.1.2.3 DEF A/AP3/GP(garden snapdragon);DEF
A/AP3/GP(thale cre);DEF A/AP3/GP(Petunia hybrida).4.4.1.2.4 GLO(garden snapdragon);GLO(tobacco).4.4.1.2.5 NMH7(alfalfa).4.4.1.2.6 ZEM
4.4.1.2.6.1 ZEM1(maize).4.4.1.2.6.2 ZEM2(maize).4.4.1.2.6.3 ZEM3 4.4.1.2.6.4 ZEM4 4.4.1.2.6.5 ZEM5 4.4.1.2.7 PI 4.4.1.2.8 PMADS3 4.4.1.2.9 Fbp2 4.4.1.2.10 Fbp3 4.4.1.2.11 AGL1 4.4.1.2.12 AGL2 4.4.1.2.13 AGL3 4.4.1.2.14 AGL4 4.4.1.2.15 AGL5 4.4.1.2.16 AGL6 4.4.1.2.17 SQA 4.4.1.2.18 O-MADS 4.4.1.2.19 TAG1 4.4.1.2.20 TDR3 4.4.1.2.21 TDR4 4.4.1.2.22 TDR5 4.4.1.2.23 TDR6 4.4.1.2.24 NAG1 4.4.1.2.25 Tobmads1 4.4.1.3 Subfamily: yeast regulators
4.4.1.3.1 MCM1(yeast).4.4.2 Family: Responders to external signals
4.4.2.0.1 SRF(clawed
frog);SRF(human);SRF(mouse);SRF(rat).4.4.3 Family: Metabolic regulators
4.4.2.0.2 RLM1(yeast).4.4.3.0.1 ARG RI(yeast).4.4.1.3.2 YBR182C 4.4.1.2.26 MADS1
4.5 Cla: beta-Barrel alpha-helix transcription factors
4.5.1 Family: E2
4.5.1.0.1 E2(BPV-1).4.6 Cla: TATA-binding proteins
4.5.1.0.2 EBNA-1 4.6.1 Family: TBP
4.6.1.0.1 TBP(human);TBP(fiion yeast);TBP(mouse);TBP(fruit 4.7 Cla: HMG.fly);TBP(yeast);TBP(thale cre);TBP(thale cre).4.7.1 Family: SOX
4.7.1.0.1 SRY(mouse);SRY(human).4.7.1.0.2 Sox-2(mouse);Sox-2(chick).4.7.1.0.3 Sox-4(human);Sox-4(mouse).4.7.1.0.4 Sox-5(mouse);Sox-5(human).4.7.1.0.5 Sox-9(human);Sox-9(mouse).4.7.1.0.6 Sox-18(mouse).4.7.1.0.7 SOX-LZ(mouse);SOX-LZ(rainbow trout).4.7.1.0.8 Sox-8 4.7.1.0.9 Sox-10 4.7.1.0.10 Sox-11 4.7.1.0.11 Sox-12 4.7.1.0.12 Sox-13 4.7.1.0.13 Sox-14 4.7.1.0.14 Sox-15 4.7.2 Family: TCF-1
4.7.1.0.15 Sox-16 4.7.2.0.1 TCF-1alpha
4.7.2.0.1.1 LEF-1L(mouse).4.7.2.0.2 TCF-1(human).4.7.2.0.1.2 LEF-1S(mouse).4.7.2.0.2.1 TCF-1A(human).4.7.2.0.2.2 TCF-1B(human).4.7.2.0.2.3 TCF-1C(human).4.7.2.0.2.4 TCF-1D(human).4.7.2.0.2.5 TCF-1E(human).4.7.2.0.2.6 TCF-1F(human).4.7.2.0.2.7 TCF-1G(human).4.7.2.0.2.8 TCF-1P 4.7.2.0.3 TCF-3(mouse).4.7.3 Family: HMG2-related
4.7.2.0.4 TCF-4
4.7.3.0.1 SSRP1(human);SSRP1(chick);SSRP1(mouse);SSRP1(rat).4.7.3.0.2 Dm-SSRP1(fruit fly).4.7.3.0.3 Ixr1(yeast).4.7.4 Family: UBF
4.7.3.0.4 DSP1(fruit fly).4.7.4.0.1 UBF
4.7.4.0.1.1 UBF1 / xUBF2
4.7.4.0.2 xUBF1
4.7.4.0.1.2 UBF2
4.7.5 Family: MATA
4.7.0 Family: Other HMG box factors
4.7.5.0.1 mat-Mc(fiion yeast).4.7.0.0.1 IRE-ABP(rat).4.7.0.0.2 MNB1b(maize);MNB1b(maize).4.7.0.0.3 Rox1(yeast).4.8 Cla: Heteromeric CCAAT factors
4.8.1 Family: Heteromeric CCAAT factors
4.8.1.0.1 CP1A(rat);CP1A(human);CP1A(mouse).4.8.1.0.2 CP1B(rat);CP1B(mouse).4.8.1.0.2.1 CP1B 4.8.1.0.2.2 CP1B 4.8.1.0.2.3 CP1B
4.8.1.0.3 CBF-C(rat).4.8.1.0.2.4 CP1B
4.9 Cla: Grainyhead
4.9.1 Family: Grainyhead
4.9.1.0.1 CP2(human);CP2(mouse).4.9.1.0.2 LBP-1a(human);LBP-1a(mouse).4.9.1.0.3 Grainyhead(fruit fly).4.10 Cla: Cold-shock domain factors.4.10.1 Family: csd
4.10.1.1 Subfamily: A(DbpA-like)
4.10.1.1.1 DbpA
4.10.1.1.1.1 DbpA(human).4.10.1.1.2 Ybx-3(mouse).4.10.1.2 Subfamily: B(YB-1/DbpB-like)
4.10.1.2.1 YB-1 / DbpB / EFI(human);YB-1 / DbpB / EFI(rat);YB-1 / DbpB / EFI(chick);YB-1 / DbpB / EFI(clawed frog);YB-1 / DbpB / EFI(human);YB-1 / DbpB / EFI(mouse).4.10.1.3 Subfamily: C(FRG Y2-like)
4.10.1.2.2 YB-3(clawed frog).4.10.1.3.1 FRG Y2(clawed frog).4.10.1.1.3 RSV-EF-II(chick).4.10.1.1.1.2 DbpAv(human).4.11 Cla: Runt.4.11.1 Family: Runt
4.11.1.1 Subfamily: PEBP2alphaA
4.11.1.1.1 PEBP2alphaA/AML3
4.11.1.1.1.1 PEBP2alphaA/Osf-2(mouse).4.11.1.1.1.2 PEBP2alphaA/Til-1(mouse).4.11.1.1.1.3 PEBP2alphaA/Til-1(Y)(mouse).4.11.1.1.1.4 PEBP2alphaA/Til-1(U)(mouse).4.11.1.1.1.5 PEBP2alphaA1/AML-3(mouse);PEBP2alphaA1/AML-3(human).4.11.1.2 Subfamily: PEBP2alphaB
4.11.1.1.1.6 PEBP2alphaA2(mouse).4.11.1.2.1 PEBP2alphaB/AML1(human).4.11.1.2.1.1PEBP2alphaB1/AML1b(mouse);PEBP2alphaB1/AML1b(human);PEBP2alphaB1/AML1b(rat).4.11.1.2.1.2 PEBP2alphaB2(mouse).4.11.1.2.1.3 AML1a(human).4.11.1.2.1.4 AML1c(human).4.11.1.2.2 Ch-runtB2(chick).4.11.1.2.1.5 AML1DeltaN(human).4.11.1.3 Subfamily: PEBP2alphaC 4.11.1.4 Subfamily: Runt
4.11.1.3.1 PEBP2alphaC1/AML2(human).4.11.1.4.1 Runt(fruit fly).4.11.1.5.1 Lozenge(fruit fly).4.11.1.5 Subfamily: Lozenge
0 Supercla: Other Transcription Factors
0.1 Cla: Copper fist proteins
0.1.1 Family: Fungal regulators
0.1.1.0.1 ACE1/CUP2(yeast).0.1.1.0.2 AMT1(yeast).0.2 Cla: HMGI(Y)
0.2.1 Family: HMGI(Y)
0.2.1.0.1 HMG I(Y)(mouse).0.2.1.0.1.1 HMG I(human).0.2.1.0.1.2 HMG Y(human).0.2.1.0.2 HMGI-C(human);HMGI-C(mouse).0.2.1.0.3 cHMGI
0.3 Cla: Pocket domain
0.3.1 Family: Rb
0.3.1.0.1 Rb(human);Rb(mouse);Rb(mink);Rb(monkey).0.3.2 Family: CBP
0.3.1.0.2 p107(human).0.3.2.0.1 CBP(mouse).0.4 Cla: E1A-like factors 0.4.1 Family: E1A
0.4.1.0.1 E1A
0.4.1.0.1.1 E1A 12S(adenovirus).0.4.1.0.1.2 E1A 13S(adenovirus type 2).0.5 Cla: AP2/EREBP-related factors
0.5.1 Family: AP2
0.5.1.0.1 AP2(thale cre).0.5.1.0.2 ANT(thale cre).0.5.1.0.3 Gl15(maize).0.5.2 Family: EREBP
0.5.1.0.4 IDS1(maize).0.5.2.0.1 ABI4(thale cre).0.5.2.0.2 CBF1/DREB1B(thale cre).0.5.2.0.3 DREB1A(thale cre).0.5.2.0.4 DREB1C(thale cre).0.5.2.0.5 DREB2A(thale cre).0.5.2.0.6 DREB2B(thale cre).0.5.2.0.7 EBP(thale cre).0.5.2.0.8 EREBP-1(tobacco).0.5.2.0.9 EREBP-2(tobacco).0.5.2.0.10 EREBP-3(tobacco).0.5.2.0.11 EREBP-4(tobacco).0.5.2.0.12 ERF1(thale cre).0.5.2.0.13 RAP2.5(thale cre).0.5.3 Family: AP2/B3
0.5.2.0.14 TINY(thale cre).0.5.3.0.1 RAV1(thale cre).0.5.3.0.2 RAV2(thale cre).The proto-oncogene c-Rel is a protein that in humans is encoded by the REL gene.[1] The c-Rel protein is a member of the NF-κB family of transcription factors and contains a Rel homology domain(RHD)at its N-terminus and two C-terminal transactivation domains.c-Rel has an important role in B-cell survival and proliferation.The REL gene is amplified or mutated in several human B-cell lymphomas, including diffuse large B-cell lymphoma and Hodgkin's lymphoma.[2]
